Top 50 All-time Anime

1. Neon Genesis Evangelion

2. Nausicaa of the Valley of the Wind

3. Laputa: Castle in the Sky

4. Mobile Suit Gundam

5. Lupin III: The Castle of Cagliostro

6. Mushi-shi

7. Ghost in the Shell Stand Alone Complex

8. My Neighbor Totoro

9. Fullmetal Alchemist

10. Ghost in the shell

11. Dragon Ball

12. Princess Mononoke

13. AKIRA

14. Spirited Away

15. Doraemon

16. Fullmetal Alchemist-Conqueror of Shamballa

17. Porco Rosso

18. Legend of the Galactic Heroes

19. Crayon Shin-chan

20. Gundam: Char’s Counterattack

21. Card Captor Sakura

22. The Melancholy of Haruhi Suzumiya

23. Kamichu!

24. Mobile Police Patlabor 2: the Movie

25. Z Gundam

26. Voices of a Distant Star

27. Mobile Police Patlabor

28. Galaxy Express 999

29. Nadia: The Secret of Blue Water

30. Manga Nippon Mukashi Banashi

31. Crayon Shin-chan: Arashi wo Yobu Appare! Sengoku Daikassen (movie)

32. Grave of the Fireflies

33. Conan, The Boy in Future

34. Howl’s Moving Castle

35. Space Battleship Yamato

36. Wings of Honneamise

37. Slam Dunk

38. Sailor Moon

39. Gundam SEED

40. Sgt. Frog

41. Gunbuster

42. Doraemon (Movie Series)

43. Brave Series

44. Cowboy Bebop

45. Samurai 7

46. Martian Successor Nadesico

47. Heidi, Girl of the Alps

48. Urusei Yatsura

49. Astro Boy

50. Lupin III (original TV series)

NOTES & Disclaimers:

Both lists also offered voters an option to write in up to ten titles that were not included in ACA's lists. The Melancholy of Haruhi Suzumiya was the top write-in anime, while Honey and Clover was the number one write-in manga (Source: ANN)

The lists is taken from JapanProbe's Top 50 anime

The original lists in Japanese can be accessed at the Japan Media Arts Festival website
Will update info on each (Editting continue... kamo...)